Automatic FR-S
Zero to 60 mph: 8.1 sec
Zero to 100 mph: 21.4 sec
Rolling start, 5–60 mph: 8.2 sec
Auto mode, 30–50 mph: 4.1 sec
Auto mode, 50–70 mph: 5.3 sec
Standing ¼-mile: 16.3 sec @ 90 mph
Top speed (drag limited): 125 mph
Source
Manual FR-S
Zero to 60 mph: 6.4 sec
Zero to 100 mph: 16.6 sec
Rolling start, 5–60 mph: 8.1 sec
Top gear, 30–50 mph: 13.1 sec
Top gear, 50–70 mph: 10.3 sec
Standing ¼-mile: 14.9 sec @ 95 mph
Top speed (drag limited): 136 mph
Source(PDF)
These numbers are from Car and Driver.
When a launch is factored out, the difference in acceleration times to 60 are minimal. The auto's taller gears do put it at a disadvantage at the car's upper speed limit.
The disparity between the 0-100 times is a bit surprising given what they recorded for the quarter miles. *shrug* Then again the auto runs out of energy 11 miles per hour earlier.