Does it go away if you rest your hand on the shifter? It is hard to tell in the video but can you tell where the noise is coming from? Directly below the shifter or rearward? Maybe put the seat down and see if it is louder that way. I don't think it is transmission associated, it sounds like it has more to do with backlash in the drive train.
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"Experience is the hardest kind of teacher. It gives you the test first and the lesson afterward." -Oscar Wilde.
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