I know I haven't updated this but I have updated the individual thread....
Link to thread:
http://www.ft86club.com/forums/showthread.php?t=98397
As of 12/9/15;
They have gone ahead and completely replace the Intake Cam Gear and tested the car and when they started the car back up in the morning the CEL still came on. They are now going to be replacing the ECU and see if that fixes the problem.
In the meantime I've been driving around in a 2015 Rav4.. It's basically the exact opposite of the fr-s, it's; bigger, heavier, taller, comfier, rides smoother, has more torque

, has AWD, automatic

, has a better sound system, better head-unit, more spacious, you get the jist....