Here is my story of a similar problem.
http://www.ft86club.com/forums/showthread.php?t=12678
I had my FR-S at the dealer 2 times to get it fixed correctly. The first time I pucked it up they adjusted the brakes to tight and I lift with a dragging brake. turned around and left it with them again over night and they got it right. I'm not a huge fan of the dealer that I used but I must say that they are normally able to get things right, just not always on the first try.